Package: bedrockbio 1.3.0

Liam Abbott

bedrockbio: Open-Access Computational Biology Datasets

Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.

Authors:Liam Abbott [aut, cre, cph]

bedrockbio_1.3.0.tar.gz
bedrockbio_1.1.0.zip(r-4.6)bedrockbio_1.1.0.zip(r-4.5)
bedrockbio_1.3.0.tgz(r-4.6-any)bedrockbio_1.3.0.tgz(r-4.5-any)
bedrockbio_1.3.0.tar.gz(r-4.7-any)bedrockbio_1.3.0.tar.gz(r-4.6-any)
bedrockbio_1.3.0.tgz(r-4.5-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
bedrockbio/json (API)
NEWS

# Install 'bedrockbio' in R:
install.packages('bedrockbio', repos = c('https://staging.r-multiverse.org', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bedrock-bio/bedrock-bio-client/issues

On CRAN:

Conda:

2.30 score 1 stars 8 scripts 3 exports 26 dependencies

Last updated from:904aaf94d6 (on v1.3.0). Checks:10 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK323
source / vignettesOK220
linux-release-x86_64OK155
linux-oldrel-x86_64OK122
macos-release-arm64OK174
macos-oldrel-arm64OK91
windows-develOK932
windows-releaseOK125
windows-oldrelOK50
wasm-releaseOK104

Exports:describe_tablelist_tablesload_table

Dependencies:blobclicpp11curlDBIdbplyrdplyrduckdbgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr